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1.
PLoS One ; 15(2): e0229359, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32092126

RESUMO

Vanadium is a transition metal that has been added recently to the EU list of Raw Critical Metals. The growing needs of vanadium primarily in the steel industry justify its increasing economic value. However, because mining of vanadium sources (i. e. ores, concentrates and vanadiferous slags) is expanding, so is vanadium environmental contamination. Bioleaching comes forth as smart strategy to deal with supply demand and environmental contamination. It requires organisms that are able to mobilize the metal and at the same time are resistant to the leachate generated. Here, we investigated the molecular mechanisms underlying vanadium resistance in Ochrobactrum tritici strains. The highly resistant strain 5bvl1 was able to grow at concentrations > 30 mM vanadate, while the O. tritici type strain only tolerated < 3 mM vanadate concentrations. Screening of O. tritici single mutants (chrA, chrC, chrF and recA) growth during vanadate exposure revealed that vanadate resistance was associated with chromate resistance mechanisms (in particular ChrA, an efflux pump and ChrC, a superoxide dismutase). We also showed that sensitivity to vanadate was correlated with increased accumulation of vanadate intracellularly, while in resistant cells this was not found. Other up-regulated proteins found during vanadate exposure were ABC transporters for methionine and iron, suggesting that cellular responses to vanadate toxicity may also induce changes in unspecific transport and chelation of vanadate.


Assuntos
Ochrobactrum/efeitos dos fármacos , Vanadatos/farmacologia , Arsênio/farmacologia , Proteínas de Bactérias/efeitos dos fármacos , Proteínas de Bactérias/metabolismo , Cromatos/farmacologia , Cromo/farmacologia , Farmacorresistência Bacteriana/efeitos dos fármacos , Testes de Sensibilidade Microbiana , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , Proteoma/efeitos dos fármacos , Proteoma/metabolismo , Vanadatos/farmacocinética , Vanádio/farmacocinética , Vanádio/farmacologia
2.
World J Microbiol Biotechnol ; 36(2): 23, 2020 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-31965334

RESUMO

Arsenic naturally occurs in the earth's crust and can be introduced in the environment by human activities. Agricultural practices in arsenic-contaminated environments pose a threat to human health. The contamination of crops contributes to the metalloid's introduction in the food chain. This study aims to test the hypotheses that the inoculation of a hyperaccumulator rhizobacterial strain, Ochrobactrum tritici As5, to the rhizosphere of rice plants reduces the arsenic presence inside the tissue of the rice plants and reduces the inhibitory effect of the metalloid on the plant's growth parameters. Inoculation of the hyperaccumulating strain O. tritici As5 showed the lowest concentration of arsenic in the plant's tissue (2.6 fold lower than sterile plants), compared to the unmodified type O. tritici SCII24 and sterile rice plants. The inoculation of the type strain SCII24 also led to a decrease in arsenic concentration in the plant tissue compared with sterile plants (1.6 fold lower than sterile plants). The difference in arsenic presence in shoots was smaller among treatment groups than in the roots, showing a similar trend. The inoculation of the hyperaccumulator As5 strain alleviated some of the toxic effects of arsenic on shoot growth compared to inoculation of the unmodified type strain. All these findings together, contribute to our understanding of the interplay between arsenic pollution, plants and their rhizobacteria, especially the role of bioaccumulation of metal(oids) by rhizobacteria, and provide important information on the prevention of arsenic uptake by crops and the development of phytostabilizers.


Assuntos
Arsênio/análise , Ochrobactrum/crescimento & desenvolvimento , Oryza/microbiologia , Arsênio/toxicidade , Biodegradação Ambiental , Produtos Agrícolas/química , Produtos Agrícolas/crescimento & desenvolvimento , Produtos Agrícolas/microbiologia , Ochrobactrum/metabolismo , Oryza/química , Oryza/crescimento & desenvolvimento , Brotos de Planta/química , Brotos de Planta/crescimento & desenvolvimento , Brotos de Planta/microbiologia , Rizosfera , Poluentes do Solo/análise , Poluentes do Solo/toxicidade
3.
J Hazard Mater ; 388: 122047, 2020 04 15.
Artigo em Inglês | MEDLINE | ID: mdl-31954311

RESUMO

Currently, radioactive waste is disposed primarily by burial in a deep geological repository. Microorganisms thriving in such contaminated environment show tolerance to radionuclides. In the present study the bacterial flora, from soil sample collected from an area around atomic power station exposed to radionuclides and heavy metals, was cultivated and assessed for thorium (Th) tolerance. Of all the isolates, strain AM7 identified as O. intermedium was selected since it could thrive at high levels of Th (1000 mg L-1). AM7 was characterized physico-chemically and its culture medium was optimized using central composite design of response surface methodology for assessing its growth properties in presence of Th. The strain also showed exceptional exopolysaccharide (EPS) production and its yield was further analyzed using one factor study to investigate the influence of each medium component. On supplementing the EPS medium with Th, no significant decrease in yield was observed. FTIR spectroscopy revealed the functional groups of EPS involved in EPS-Th binding. To the best of our knowledge, this is the first report showing exceptional Th-tolerance by any bacteria. Such study will help other researchers to strategize an environment-friendly way of radwaste disposal.


Assuntos
Biopolímeros/metabolismo , Ochrobactrum/efeitos da radiação , Polissacarídeos Bacterianos/metabolismo , Tolerância a Radiação , Poluentes Radioativos do Solo/farmacologia , Compostos de Tório/farmacologia , Consórcios Microbianos , Ochrobactrum/genética , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , RNA Ribossômico 16S
4.
Sci Rep ; 9(1): 13129, 2019 09 11.
Artigo em Inglês | MEDLINE | ID: mdl-31511547

RESUMO

Reverse transcription quantitative PCR (RT-qPCR), a method of choice for quantification of gene expression changes, requires stably expressed reference genes for normalization of data. So far, no reference genes were established for the Alphaproteobacteria of the genus Ochrobactrum. Here, we determined reference genes for gene expression studies in O. quorumnocens A44. Strain A44 was cultured under 10 different conditions and the stability of expression of 11 candidate genes was evaluated using geNorm, NormFinder and BestKeeper. Most stably expressed genes were found to be rho, gyrB and rpoD. Our results can facilitate the choice of reference genes in the related Ochrobactrum strains. O. quorumnocens A44 is able to inactivate a broad spectrum of N-acyl homoserine lactones (AHLs) - the quorum sensing molecules of many Gram-negative bacteria. This activity is attributed to AiiO hydrolase, yet it remains unclear whether AHLs are the primary substrate of this enzyme. Using the established RT-qPCR setup, we found that the expression of the aiiO gene upon exposure to two AHLs, C6-HLS and 3OC12-HSL, does not change above the 1-fold significance threshold. The implications of this finding are discussed in the light of the role of quorum sensing-interfering enzymes in the host strains.


Assuntos
Acil-Butirolactonas/metabolismo , Proteínas de Bactérias/metabolismo , Ochrobactrum/genética , Ochrobactrum/metabolismo , Reação em Cadeia da Polimerase em Tempo Real/normas , Proteínas de Bactérias/genética , Ochrobactrum/crescimento & desenvolvimento , Percepção de Quorum , Padrões de Referência
5.
World J Microbiol Biotechnol ; 35(8): 129, 2019 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-31376017

RESUMO

Metal whole-cell biosensors (WCBs) have been reported as very useful tools to detect and quantify the presence of bioavailable fractions of certain metals in water and soil samples. In the current work, two bacterial WCBs able to report Cr(VI) presence and plants growing on Cr(VI)-enriched soil/medium were used to assess the potential transfer of this metal to organisms of higher trophic levels, and the risk of transfer to the food chain. To do it, the functionality of the WCBs within tissues of inoculated plants in contact with Cr(VI)-contaminated soil and water was studied in vitro and in a controlled greenhouse environment. One WCB was the previously described Ochrobactrum tritici pCHRGFP2 and the second, Nitrospirillum amazonense pCHRGFP2, is a newly engineered naturally-occurring endophytic microorganism. Three rice varieties (IAC 4440, BRS 6 CHUÍ, IRGA 425) and one maize variety (1060) were tested as hosts and subjected to Cr(VI) treatments (25 µM), with different results obtained. Inoculation of each WCB into plants exposed to Cr(VI) showed GFP expression within plant tissues. WCBs penetrated the root tissues and later colonized the shoots and leaves. In general, a higher fluorescence signal was detected in roots, together with a higher Cr content and denser WCB colonization. Best fluorescence intensities per plant biomass of shoots were obtained for plant host IRGA 425. Therefore, by analyzing colonized tissues, both WCBs allowed the detection of Cr(VI) contamination in soils and its transfer to plants commonly used in crops for human diet.


Assuntos
Técnicas Biossensoriais/métodos , Cromo/análise , Ochrobactrum/crescimento & desenvolvimento , Oryza/química , Rhodospirillaceae/crescimento & desenvolvimento , Zea mays/química , Disponibilidade Biológica , Engenharia Metabólica , Microscopia de Fluorescência , Ochrobactrum/genética , Ochrobactrum/metabolismo , Oryza/crescimento & desenvolvimento , Oryza/microbiologia , Rhodospirillaceae/genética , Rhodospirillaceae/metabolismo , Poluentes do Solo/análise , Poluentes Químicos da Água/análise , Zea mays/crescimento & desenvolvimento , Zea mays/microbiologia
6.
J Basic Microbiol ; 59(8): 820-833, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31232462

RESUMO

During production and characterization of exopolysaccharides (EPS) of Ochrobactrum pseudintermedium C1, it was observed that an experimental change in the basic hydrocarbon type of substrate for bacterial utilization led to elicitation of different surface-active properties in the EPS produced. In the sugar substrate, it elicited surfactant property, while in oil substrates it elicited emulsifying property, which indicated that the EPS might be different. Consequently, attention was focused on a detailed analysis of this substrate-specific EPS. Utilizing waste sugar, edible, and mineral oil substrates, EPS produced in each situation was characterized. Besides estimating surface activity and thermostability, each substrate-specific EPS was analyzed by Fourier-transform infrared spectroscopy, gas chromatography-mass spectroscopy, 1 H-nuclear magnetic resonance, and matrix-assisted laser desorption/ionization-time of flight mass spectroscopy to find any structural difference. The results were significantly contrasting although the similarity in molecular mass suggested a basic similarity in polysaccharide structure. Morphological differences were also evident both macroscopically and microscopically with scanning electron microscopy. As the surface-active property of EPS was dependent on the substrate utilized, their structural differences might account for it. These diverse surface activities of EPS produced by a single bacterial strain simply by changing the nature of substrate would also augment their bioapplications. Moreover, utilization of waste and easily available substrates should make such applications convenient, ecofriendly, and cost-worthy.


Assuntos
Hidrocarbonetos/metabolismo , Ochrobactrum/química , Polissacarídeos Bacterianos/química , Meios de Cultura/metabolismo , Microscopia Eletrônica de Varredura , Peso Molecular , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , Polissacarídeos Bacterianos/biossíntese , Polissacarídeos Bacterianos/ultraestrutura , Solubilidade , Propriedades de Superfície , Temperatura
7.
N Biotechnol ; 43: 37-43, 2018 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-28720419

RESUMO

Piracetam (2-oxo-1-pyrrolidine acetamide) is a popular cognitive enhancer, which has recently been detected in waste and drinking water. Nootropic drugs are designed to affect human metabolism and act on the nervous system, but their environmental effects have yet to be the subject of detailed studies. In this report, we present the efficient biodegradation of the cognitive enhancer, piracetam. Two bacterial strains capable of using this compound as the sole carbon source were isolated and later identified as Ochrobactrum anthropi strain MW6 and Ochrobactrum intermedium strain MW7. The compound's mineralization and the cleavage of the heterocyclic ring were shown in the experiments with 14C-labeled piracetam. This is also the first report of a pharmaceutical's degradation by the Ochrobactrum genus. This study presents model microorganisms that can be used in further investigation of piracetam's degradation pathways as well as enzymes and genes involved in the process.


Assuntos
Nootrópicos/metabolismo , Ochrobactrum/metabolismo , Piracetam/metabolismo , Cromatografia Líquida de Alta Pressão , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/isolamento & purificação , Piracetam/análise
8.
Bioprocess Biosyst Eng ; 38(11): 2095-106, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26271337

RESUMO

The growth kinetics and biodegradation of two waste lubricating oil samples including waste engine oil (WEO) and waste transformer oil (WTO) were studied using pure isolates and mixed culture of Ochrobactrum sp. C1 and Bacillus sp. K1. The mixed culture significantly influenced degradation efficiency of the pure isolates through bioaugmentation process. In particular, the mixed culture was capable of growing on various n-alkanes and polycyclic aromatic hydrocarbons and was able to tolerate unusually high concentrations of waste lubricants (WEO-86.0 g/L and WTO-81.5 g/L). The initial concentration of waste lubricating oils has been varied in the range of 1-10 % (v/v). Under this experimental range, the bacterial growth has been observed to follow Haldane-type kinetics characterizing the presence of substrate inhibition. Haldane model was used to fit the exponential growth data and the following kinetic parameters were obtained: µ max = 0.078 h(-1), K S = 23.101 g/L, K i = 43.844 g/L for WEO; and µ max = 0.044 h(-1), K S = 10.662 g/L, K i = 58.310 g/L for WTO. The values of intrinsic kinetic parameters, like specific growth rate µ max, half saturation constant, K S, inhibition constant, K i and the maximum substrate concentration, S max and growth yield coefficient Y x/s , have been determined using each model hydrocarbon and their mixture as limiting substrate. Relative changes in the values of the kinetic parameters have been correlated to the number of carbon atoms present in n-alkanes. The metabolites from degradation of model hydrocarbon compounds have been identified by GC-MS to elucidate the possible pathway of waste lubricating oil degradation process.


Assuntos
Bacillus/crescimento & desenvolvimento , Reatores Biológicos , Consórcios Microbianos , Óleo Mineral/metabolismo , Modelos Biológicos , Ochrobactrum/crescimento & desenvolvimento , Biodegradação Ambiental
9.
Ecotoxicol Environ Saf ; 114: 23-30, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25594688

RESUMO

The present study demonstrates the de-colorization and degradation of textile effluent by coculture consisting of three bacterial species isolated from textile effluent contaminated environment with an aim to reduce the treatment time. The isolates were identified as Ochrobactrum sp., Pseudomonas aeruginosa and Providencia vermicola by 16S rRNA analysis. Their secondary structure was predicted and GC content of the sequence was found to be 54.39, 52.10, and 52.53%. The co-culture showed a prominent increase in the degradation activity due to the action of oxidoreductase enzymatic mechanism of laccase, NADH-DCIP reductase and azoreductase activity. The biodegradability index of 0.75 was achieved with 95% chemical oxygen demand (COD) reduction in 16 h and 78 and 85% reduction in total organic carbon (TOC) and total solids was observed. Bioaccumulation of metals was identified by X-ray diffraction (XRD) analysis. The effective decolorization was confirmed from the results of UV-vis spectroscopy, high performance liquid chromatography and Fourier transformed infrared spectrometer analyzes. The possible degradation pathway was obtained from the analysis of liquid chromatography-mass spectroscopy analysis and the metabolites such as 2-amino naphthalene and N-phenyl-1.3,5 triazine were observed. The toxic nature of the effluent was analyzed using phyto-toxicity, cell-death assay and geno-toxicity tests.


Assuntos
Corantes/análise , Ochrobactrum/crescimento & desenvolvimento , Pseudomonas aeruginosa/crescimento & desenvolvimento , Águas Residuárias/microbiologia , Poluentes Químicos da Água/análise , Purificação da Água/métodos , Biodegradação Ambiental , Análise da Demanda Biológica de Oxigênio , Cromatografia Líquida de Alta Pressão , Técnicas de Cocultura , Corantes/toxicidade , Ochrobactrum/enzimologia , Ochrobactrum/isolamento & purificação , Cebolas/efeitos dos fármacos , Cebolas/crescimento & desenvolvimento , Pseudomonas aeruginosa/enzimologia , Pseudomonas aeruginosa/isolamento & purificação , Espectroscopia de Infravermelho com Transformada de Fourier , Testes de Toxicidade , Águas Residuárias/química , Poluentes Químicos da Água/toxicidade , Difração de Raios X
10.
J Appl Microbiol ; 117(5): 1283-92, 2014 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-25155583

RESUMO

AIMS: Isolation and identification of bacteria capable of degrading organophosphate pesticide quinalphos and elucidation of its biodegradative pathway. METHODS AND RESULTS: A bacterium capable of degrading organophosphate pesticides was isolated from the pesticide-contaminated soil samples by selective enrichment on quinalphos (QP) as a sole source of carbon and energy. The bacterial strain was identified as Ochrobactrum sp. strain HZM on the basis of its morphological and biochemical characteristics and by phylogenetic analysis based on 16S rRNA gene sequences. The organism utilized various organophosphate pesticides such as quinalphos, profenofos, parathion-methyl and chlorpyrifos as growth substrates. Response surface methodology (RSM) showed optimum conditions for quinalphos degradation at pH 7 and 27°C. 2-Hydroxyquinoxaline and diethyl phosphate were identified as metabolites of quinalphos degradation by HPLC and GC-MS analysis. Cell-free extract of Ochrobactrum sp. strain HZM grown on quinalphos contained the quinalphos hydrolase activity. CONCLUSIONS: A bacterial strain capable of degrading quinalphos was isolated and identified as Ochrobactrum sp. strain HZM. The organism utilized organophosphate pesticides quinalphos, profenofos, parathion-methyl and chlorpyrifos as carbon sources. The organism degraded quinalphos by hydrolysis to yield 2-hydroxyquinoxaline and diethyl phosphate which were further utilized as carbon sources. SIGNIFICANCE AND IMPACT OF THE STUDY: The isolated bacterium Ochrobactrum sp. strain HZM was versatile in degrading various organophosphate pesticides. There was complete mineralization of quinalphos by Ochrobactrum sp. This strain could potentially be useful in the bioremediation of soil and water contaminated with toxic organophosphate pesticides.


Assuntos
Inseticidas/metabolismo , Ochrobactrum/metabolismo , Compostos Organotiofosforados/metabolismo , Biodegradação Ambiental , Ochrobactrum/citologia , Ochrobactrum/crescimento & desenvolvimento , Organofosfatos/metabolismo
11.
J Basic Microbiol ; 54(4): 296-305, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23553414

RESUMO

A Gram negative hexavalent chromium (Cr(VI)) reducing bacteria, Ochrobactrum sp. Cr-B4 (genbank accession number: JF824998) was isolated from the aerator water of an activated sludge process of a wastewater treatment facility of a dye and pigment based specialty chemical industry. It showed a resistance for 1000 mg L(-1) Cr(VI). It exhibited resistance against other heavy metal ions like Ni(2+) (900 mg L(-1) ), Cu(2+) (500 mg L(-1) ), Pb(2+) (800 mg L(-1) ), and Cd(2+) (250 mg L(-1) ), Zn(2+) (700 mg L(-1) ), Fe(3+) (800 mg L(-1) ), and against selected antibiotics. Cr-B4 could efficiently reduce 200 mg L(-1) Cr(VI) completely in nutrient and LB media and could convert Cr(VI) to Cr(III) efficiently. Cr(VI) reduction in nutrient media followed allosteric enzyme kinetics with Km values of 59.39 mg L(-1) and Vmax values of 47.03 mg L(-1) h(-1) . The reduction in LB media followed Michaelis-Menten kinetics with Km values of 99.52 mg L(-1) and Vmax of 77.63 mg L(-1) h(-1) . Scanning electron micrograms revealed the presence of extracellular polymeric secretions.


Assuntos
Cromo/metabolismo , Ochrobactrum/metabolismo , Poluentes Químicos da Água/metabolismo , Antibacterianos/farmacologia , Cátions Bivalentes , Cinética , Metais Pesados/metabolismo , Microscopia Eletrônica de Varredura/métodos , Ochrobactrum/efeitos dos fármacos , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/isolamento & purificação , Oxirredução , Esgotos/microbiologia , Purificação da Água
12.
PLoS One ; 8(12): e82603, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24386105

RESUMO

Neonicotinoid insecticides are one of the most important commercial insecticides used worldwide. The potential toxicity of the residues present in environment to humans has received considerable attention. In this study, a novel Ochrobactrum sp. strain D-12 capable of using acetamiprid as the sole carbon source as well as energy, nitrogen source for growth was isolated and identified from polluted agricultural soil. Strain D-12 was able to completely degrade acetamiprid with initial concentrations of 0-3000 mg · L(-1) within 48 h. Haldane inhibition model was used to fit the special degradation rate at different initial concentrations, and the parameters q max, K s and K i were determined to be 0.6394 (6 h)(-1), 50.96 mg · L(-1) and 1879 mg · L(-1), respectively. The strain was found highly effective in degrading acetamiprid over a wide range of temperatures (25-35 °C) and pH (6-8). The effects of co-substrates on the degradation efficiency of acetamiprid were investigated. The results indicated that exogenously supplied glucose and ammonium chloride could slightly enhance the biodegradation efficiency, but even more addition of glucose or ammonium chloride delayed the biodegradation. In addition, one metabolic intermediate identified as N-methyl-(6-chloro-3-pyridyl)methylamine formed during the degradation of acetamiprid mediated by strain D-12 was captured by LC-MS, allowing a degradation pathway for acetamiprid to be proposed. This study suggests the bacterium could be a promising candidate for remediation of environments affected by acetamiprid.


Assuntos
Ochrobactrum/metabolismo , Piridinas/metabolismo , Solo/química , Biodegradação Ambiental , Concentração de Íons de Hidrogênio , Neonicotinoides , Ochrobactrum/genética , Ochrobactrum/crescimento & desenvolvimento , Filogenia , Piridinas/química , RNA Ribossômico 16S/genética , Temperatura
13.
Ecotoxicology ; 22(2): 363-76, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23238642

RESUMO

Sixty-four arsenic (As) resistant bacteria isolated from an arsenic rich groundwater sample of West Bengal were characterized to investigate their potential role in subsurface arsenic mobilization. Among the isolated strains predominance of genera Agrobacterium/Rhizobium, Ochrobactrum and Achromobacter which could grow chemolitrophically and utilize arsenic as electron donor were detected. Higher tolerance to As(3+) [maximum tolerable concentration (MTC): ≥10 mM], As(5+) (MTC: ≥100 mM) and other heavy metals like Cu(2+), Cr(2+), Ni(2+) etc. (MTC: ≥10 mM), presence of arsenate reductase and siderophore was frequently observed among the isolates. Ability to produce arsenite oxidase and phosphatase enzyme was detected in 50 and 34 % of the isolates, respectively. Although no direct correlation among taxonomic identity of bacterial strains and their metabolic abilities as mentioned above was apparent, several isolates affiliated to genera Ochrobactrum, Achromobacter and unclassified Rhizobiaceae members were found to be highly resistant to As(3+) and As(5+) and positive for all the test properties. Arsenate reductase activity was found to be conferred by arsC gene, which in many strains was coupled with arsenite efflux gene arsB as well. Phylogenetic incongruence between the 16S rRNA and ars genes lineages indicated possible incidence of horizontal gene transfer for ars genes. Based on the results we propose that under the prevailing low nutrient condition inhabitant bacteria capable of using inorganic electron donors play a synergistic role wherein siderophores and phosphatase activities facilitate the release of sediment bound As(5+), which is subsequently reduced by arsenate reductase resulting into the mobilization of As(3+) in groundwater.


Assuntos
Arsenicais/efeitos adversos , Bactérias/efeitos dos fármacos , Farmacorresistência Bacteriana , Água Subterrânea/química , Água Subterrânea/microbiologia , Microbiologia da Água , Poluentes Químicos da Água/toxicidade , Achromobacter/efeitos dos fármacos , Achromobacter/crescimento & desenvolvimento , Achromobacter/metabolismo , Agrobacterium/efeitos dos fármacos , Agrobacterium/crescimento & desenvolvimento , Agrobacterium/metabolismo , Arseniato Redutases/metabolismo , Arsenicais/análise , Arsenicais/metabolismo , Bactérias/classificação , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Bactérias/metabolismo , Proteínas de Bactérias/metabolismo , Contagem de Colônia Microbiana , DNA Bacteriano/análise , Relação Dose-Resposta a Droga , Índia , Ochrobactrum/efeitos dos fármacos , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , Oxirredutases/metabolismo , Monoéster Fosfórico Hidrolases/metabolismo , Filogenia , RNA Ribossômico 16S/genética , Rhizobium/efeitos dos fármacos , Rhizobium/crescimento & desenvolvimento , Rhizobium/metabolismo , Ribotipagem , Fatores de Tempo , Poluentes Químicos da Água/análise , Poluentes Químicos da Água/metabolismo
14.
Sensors (Basel) ; 12(12): 17608-19, 2012 Dec 18.
Artigo em Inglês | MEDLINE | ID: mdl-23250280

RESUMO

The ability to colonize the host plants' rhizospheres is a crucial feature to study in the case of Plant Growth Promoting Rhizobacteria (PGPRs) with potential agricultural applications. In this work, we have created GFP-tagged derivatives of three candidate PGPRs: Bacillus subtilis MB73/2, Pseudomonas sp. P482 and Ochrobactrum sp. A44. The presence of these strains in the rhizosphere of soil-grown potato (Solanum tuberosum L.) was detected with a classical fluorescence microscope and a confocal laser scanning microscope (CLSM). In this work, we have used a broad-field-of-view CLMS device, dedicated to in vivo analysis of macroscopic objects, equipped with an automated optical zoom system and tunable excitation and detection spectra. We show that features of this type of CLSM microscopes make them particularly well suited to study root colonization by microorganisms. To facilitate the detection of small and scattered bacterial populations, we have developed a fast and user-friendly enrichment method for root sample preparation. The described method, thanks to the in situ formation of mini-colonies, enables visualization of bacterial colonization sites on large root fragments. This approach can be easily modified to study colonization patterns of other fluorescently tagged strains. Additionally, dilution plating of the root extracts was performed to estimate the cell number of MB73/2, P482 and A44 in the rhizosphere of the inoculated plants.


Assuntos
Bacillus subtilis/crescimento & desenvolvimento , Ochrobactrum/crescimento & desenvolvimento , Pseudomonas/crescimento & desenvolvimento , Rizosfera , Solanum tuberosum/microbiologia , Proteínas de Fluorescência Verde , Microscopia Confocal , Raízes de Plantas/microbiologia , Microbiologia do Solo
15.
Mar Pollut Bull ; 64(6): 1177-85, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22498316

RESUMO

Ochrobactrum sp. N1, Brevibacillus parabrevis N2, B. parabrevis N3 and B. parabrevis N4 were selected when preparing a mixed bacterial consortium based on the efficiency of crude oil utilization. A crude oil degradation rate of the N-series microbial consortium reached upwards of 79% at a temperature of 25 °C in a 3.0% NaCl solution in the shake flask trial. In the mesocosm experiment, a specially designed device was used to simulate the marine environment. The internal tank size was 1.5 m (L)×0.8 m (W)×0.7 m (H). The microbial growth conditions, nutrient utilization and environmental factors were thoroughly investigated. Over 51.1% of the crude oil was effectively removed from the simulated water body. The escalation process (from flask trials to the mesocosm experiment), which sought to represent removal under conditions more similar to the field, proved the high efficiency of using N-series bacteria in crude oil degradation.


Assuntos
Bactérias/metabolismo , Consórcios Microbianos , Petróleo/metabolismo , Água do Mar/microbiologia , Poluentes Químicos da Água/metabolismo , Bactérias/classificação , Bactérias/crescimento & desenvolvimento , Biodegradação Ambiental , Brevibacillus/crescimento & desenvolvimento , Brevibacillus/metabolismo , Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , Petróleo/análise , Água do Mar/química , Poluentes Químicos da Água/análise
16.
Huan Jing Ke Xue ; 33(11): 3956-61, 2012 Nov.
Artigo em Chinês | MEDLINE | ID: mdl-23323431

RESUMO

The strain Ochrobactrum sp. CH10 was a highly efficient phenol degrading bacterial strain isolated from soil in a constructed wetland in Yuan Dynasty Capital City Wall Relics in Beijing. Growth and biodegradation were investigated in details with phenol as the sole carbon and energy source. The best growth and most efficient phenol biodegradation occurred when the strain was cultured in medium containing 400 mg x L(-1) phenol at initial pH of 7.0 and 30 degrees C, with 5% inoculation volume. The phenol degradation rate was around 100% , 92.3 and 82.2% with an initial concentration of 400, 900 and 1 000 mg x L(-1) phenol in 24, 44 and 48 h, respectively. Phenol degradation kinetic studies indicated that the strain followed Haldane's model, and the parameters were: upsilon(max) (maximum specific rate) = 0.126 h(-1), K(s) (half-saturation constant) = 23.53 mg x L(-1) and K(I) (inhibition constant) = 806.1 mg x L(-1). The phenol-limited growth kinetics of CH10 by Andrews's model also followed a similar trend to that of phenol degradation. Among all the strains belonging to Ochrobactrum genus, this strain is the most efficient at present. The strain has a good application potential for the phenolic wastewater treatment.


Assuntos
Ochrobactrum/crescimento & desenvolvimento , Ochrobactrum/metabolismo , Fenol/isolamento & purificação , Microbiologia do Solo , Biodegradação Ambiental , China , Cinética , Ochrobactrum/classificação , Fenol/metabolismo , Águas Residuárias/química , Áreas Alagadas
17.
J Hazard Mater ; 198: 31-9, 2011 Dec 30.
Artigo em Inglês | MEDLINE | ID: mdl-22018866

RESUMO

Hexavalent chromium (Cr(VI)) is a toxic environmental contaminant which detoxification consists in reduction to Cr(III). In this work, the Cr(VI)-resistant and reducing Ochrobactrum tritici 5bvl1 produced phosphate nanoparticles upon exposure to Cr(VI) and Fe(III), effectively removing chromium from solution. Under Cr(VI) stress, higher siderophore production by strain 5bvl1 was observed. Cr(VI) toxicity was decreased in presence of Fe(III), increasing the growth and Cr(VI)-reduction rates in cell cultures, lowering the amount of morphologically compromised cells and promoting chromium immobilization as insoluble extracellular phosphate complexes. The formation of phosphate nanoparticles increased with Cr(VI) and Fe(III) concentrations and was also stimulated by Ni(II). Under these experimental conditions, nanoparticle formation occurred together with enhanced inorganic phosphate consumption by cells and increased polyphosphate kinase (PPK) activity. NMR analysis of the particles showed the presence of both polyphosphate and phosphonate together with orthophosphate, and FT-IR supported these results, also showing evidences of Cr(III) coordination. This work demonstrated that O. tritici 5bvl1 possesses protection mechanisms against chromium toxicity other than the presence of the Cr(VI) pump and SOD related enzymes previously described. Future assessment of the molecular regulation of production of these nanoparticles will open new perspectives for remediation of metal contaminated environments.


Assuntos
Cromo/farmacologia , Nanopartículas , Ochrobactrum/metabolismo , Fosfatos/metabolismo , Ferro/farmacologia , Espectroscopia de Ressonância Magnética , Microscopia Eletrônica de Varredura , Ochrobactrum/efeitos dos fármacos , Ochrobactrum/crescimento & desenvolvimento , Oxirredução , Espectroscopia de Infravermelho com Transformada de Fourier
18.
Chemosphere ; 85(4): 584-90, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21764101

RESUMO

In this study, the potential of rhizospheric bacteria in promoting the growth and Pb accumulation by the woody plant Eucalyptus camaldulensis under hydroponic conditions was investigated for the first time. Three Pb-tolerant bacteria were isolated from the rhizosphere of E. camaldulensis grown in Pb-contaminated soils in the Bo Ngam Pb mine, Thailand. Based on analysis of partial 16S rRNA gene sequence, the three isolates were identified as Microbacterium paraoxydans BN-2, Ochrobactrum intermedium BN-3, and Bacillus fusiformis BN-4. Among these strains, O. intermedium BN-3 showed the highest tolerance to not only Pb but also Cd and Zn. After growth in the presence of Pb, the membranes of O. intermedium BN-3 cells exhibited an increase in unsaturated fatty acid levels but a decrease in fluidity. In hydroponic studies, inoculation of O. intermedium BN-3 significantly increased the biomass and Pb accumulation by E. camaldulensis compared to the uninoculated control. The results suggested the role of the natural rhizospheric bacteria localized to the root surface of E. camaldulensis in promoting Pb accumulation and plant growth. Our results indicate that O. intermedium BN-3 and other indigenous rhizospheric bacteria have the potential to improve the efficiency of phytoremediation of Pb-contaminated sites.


Assuntos
Eucalyptus/metabolismo , Chumbo/metabolismo , Ochrobactrum/isolamento & purificação , Poluentes do Solo/metabolismo , Actinomycetales/genética , Actinomycetales/crescimento & desenvolvimento , Actinomycetales/isolamento & purificação , Bacillus/genética , Bacillus/crescimento & desenvolvimento , Bacillus/isolamento & purificação , Biodegradação Ambiental , Biomassa , Fluidez de Membrana , Ochrobactrum/genética , Ochrobactrum/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Brotos de Planta/metabolismo , RNA Ribossômico 16S/genética , Microbiologia do Solo
19.
Bioresour Technol ; 102(19): 9148-54, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21764300

RESUMO

A novel bacterium, Ochrobactrum sp. T, capable of simultaneous debromination and aerobic mineralization of tetrabromobisphenol-A (TBBPA), was isolated from a sludge sample collected from an electronic-waste recycling site. The bacterium exhibited maximal debrominase activity at pH 6.5, 35 °C, and 200 rpm in Luria-Bertani culture medium. Initial TBBPA concentration and pH had more significant effects on degradation efficiency than those of temperature and inoculum size. Degradation and debromination efficiencies of 91.8% and 86.7%, respectively, were achieved within 72 h under optimized conditions of 35 °C, pH 7.0, inoculum volume of 25 mL, and TBBPA concentration of 3 mg L⁻¹. In addition, a 35.6% decrease in total organic carbon was observed after the degradation of 5 mg L⁻¹ TBBPA for 120 h. Eight metabolic intermediates were identified during the biodegradation of TBBPA. This study is the first report to propose a one-step process for TBBPA debromination and mineralization by a single bacterial strain.


Assuntos
Resíduo Eletrônico , Halogenação , Ochrobactrum/metabolismo , Bifenil Polibromatos/metabolismo , Biodegradação Ambiental , Concentração de Íons de Hidrogênio , Estrutura Molecular , Ochrobactrum/genética , Ochrobactrum/crescimento & desenvolvimento , Filogenia , RNA Ribossômico 16S/genética , Especificidade da Espécie
20.
J Microbiol Biotechnol ; 19(8): 836-44, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19734723

RESUMO

A denitrification bacterium was isolated from riverbed soil and identified as Ochrobactrum sp., whose specific enzymes for denitrification metabolism were biochemically assayed or confirmed with specific coding genes. The denitrification activity of strain G3-1 was proportional to glucose/nitrate balance, which was consistent with the theoretical balance (0.5). The modified graphite felt cathode with neutral red, which functions as a solid electron mediator, enhanced the electron transfer from electrode to bacterial cell. The porous carbon anode was coated with a ceramic membrane and cellulose acetate film in order to permit the penetration of water molecules from the catholyte to the outside through anode, which functions as an air anode. A non-compartmented electrochemical bioreactor (NCEB) comprised of a solid electron mediator and an air anode was employed for cultivation of G3-1 cells. The intact G3-1 cells were immobilized in the solid electron mediator, by which denitrification activity was greatly increased at the lower glucose/nitrate balance than the theoretical balance (0.5). Metabolic stability of the intact G3-1 cells immobilized in the solid electron mediator was extended to 20 days, even at a glucose/nitrate balance of 0.1.


Assuntos
Reatores Biológicos , Nitratos/metabolismo , Nitrogênio/metabolismo , Ochrobactrum/metabolismo , Técnicas Eletroquímicas , Nitrato Redutase/metabolismo , Nitratos/química , Nitrito Redutases/metabolismo , Nitrogênio/química , Ochrobactrum/genética , Ochrobactrum/crescimento & desenvolvimento , Oxirredução , RNA Ribossômico 16S/análise , RNA Ribossômico 16S/genética , Microbiologia do Solo , Eliminação de Resíduos Líquidos
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